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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.011G054000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 419aa MW: 46796.1 Da PI: 6.0618 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.011G054000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 46 | 9.5e-15 | 198 | 277 | 3 | 78 |
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT- CS
B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegD 78
k l++sdv+++gr+vlpk+ +ee+ + +e++ l+l+d s+++W +kl++ ++ks++yvl+ ++ eFvk +gL++gD
Potri.011G054000.1 198 KDLKNSDVGSLGRIVLPKREVEENlpPLHDKEGILLVLRDiYSNQEWGLKLKFwtNNKSRMYVLE-NTGEFVKRHGLETGD 277
7799**********************55556889******7788*******99888888889999.**************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MENVFPTSST NSGNTTTTTN ASSVMMGCPQ NSQFSSIYGP LSYPSTPSSS LTQSNYFAPQ 60 YYTTPPCETT QFPSTDSLDQ RSQYTPAADP FYPVMVGQNA IEMQRSCILQ PNALQLEQER 120 RALDAYKTKV ARCMRKLARQ RRLGRASSGA SSTRITDASR LALHGAGTDG QNSRTNTSKD 180 LFEFLTPDNK KLRALLRKDL KNSDVGSLGR IVLPKREVEE NLPPLHDKEG ILLVLRDIYS 240 NQEWGLKLKF WTNNKSRMYV LENTGEFVKR HGLETGDYES KNLYFSITKV QRPESALAQT 300 PHPKSHNCNH LTEHMWQDGD EEYTSLALLT EQLENKEQEE ANSLGAVPMD FSCSYTNELE 360 LNNNPFNNIS TYTQPASAAM QTSPPNGKMK AVDDSHDVDD CYTGLGMLPD VHSYNFSL*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j9c_A | 4e-43 | 186 | 287 | 3 | 110 | B3 domain-containing transcription factor LEC2 |
6j9c_D | 4e-43 | 186 | 287 | 3 | 110 | B3 domain-containing transcription factor LEC2 |
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