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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.011G005300.1 |
Common Name | POPTR_0021s00530g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 156aa MW: 18200 Da PI: 9.3876 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.011G005300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 30.9 | 4.8e-10 | 6 | 100 | 3 | 95 |
EE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 3 kvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrs 88
k+l +++ k++rl +p + ++++ +g+ +s++ + d + +W++k+++r+ ++ +l++ W ++v+++gLk gD v++++d+++
Potri.011G005300.1 6 KIL-SESDAKNKRLEFPARSLSAFpmpDGQ--NSVQFVAFDMQEHQWRLKVSIRNEGRYpkPWLKGEWHDYVHQKGLKKGDKVILTMDEEE 93
555.455566778********999866444..677888889999*******99888877889************************99887 PP
EE..EEE CS
B3 89 efelvvk 95
++e +
Potri.011G005300.1 94 NGERIYR 100
7765555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 156 aa
Download sequence Send
to blast |
MEVMNKILSE SDAKNKRLEF PARSLSAFPM PDGQNSVQFV AFDMQEHQWR LKVSIRNEGR 60 YPKPWLKGEW HDYVHQKGLK KGDKVILTMD EEENGERIYR IRAEKKHFGF CGYSSNMFDK 120 NIPLTIIFKH LVKGTCMSEQ SNIVHSYMIV FNNIV*
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