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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.010G248300.2 |
Common Name | POPTR_0010s25460g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 322aa MW: 36154.9 Da PI: 8.3761 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.010G248300.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.9 | 3.4e-16 | 251 | 301 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L+ +l el+++
Potri.010G248300.2 251 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENERLR-KLRELENML 301
79****************************************.999999985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MGMQTKGSQG DGSSHYKQSQ LQPLARQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWTVEATQTM GLEVEGTPFA NQTALQRQAS LSLTSDLSKK TVDEVWKDIQ QSKNDRGIKS 120 RERQPTFGEM TLEDFLVKAG VVDEGSMDKK DGGSIVGVDT NAAQQFQQQG QWLQYPPQPQ 180 YQQPQQSMMG VYMPGQSTLQ PLHMGAGSMM DVSYSENQVA LPPPLMGTLS DTQAPARKRG 240 VPDMIEKTVE RRQKRMIKNR ESAARSRARK QAYTNELENK ISRLEEENER LRKLRELENM 300 LPCVPLPEPK YQLRRTTSAP F*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC210341 | 0.0 | AC210341.1 Populus trichocarpa clone POP085-M05, complete sequence. |