PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.010G248300.2
Common NamePOPTR_0010s25460g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 322aa    MW: 36154.9 Da    PI: 8.3761
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.010G248300.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.93.4e-16251301556
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                         +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L+ +l el+++ 
  Potri.010G248300.2 251 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENERLR-KLRELENML 301
                         79****************************************.999999985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-14242298No hitNo description
SMARTSM003381.4E-12247315IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.438249293IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11251295No hitNo description
CDDcd147073.52E-23251297No hitNo description
PfamPF001704.9E-12251294IPR004827Basic-leucine zipper domain
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MGMQTKGSQG DGSSHYKQSQ LQPLARQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWTVEATQTM GLEVEGTPFA NQTALQRQAS LSLTSDLSKK TVDEVWKDIQ QSKNDRGIKS  120
RERQPTFGEM TLEDFLVKAG VVDEGSMDKK DGGSIVGVDT NAAQQFQQQG QWLQYPPQPQ  180
YQQPQQSMMG VYMPGQSTLQ PLHMGAGSMM DVSYSENQVA LPPPLMGTLS DTQAPARKRG  240
VPDMIEKTVE RRQKRMIKNR ESAARSRARK QAYTNELENK ISRLEEENER LRKLRELENM  300
LPCVPLPEPK YQLRRTTSAP F*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.010G248300.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2103410.0AC210341.1 Populus trichocarpa clone POP085-M05, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006378844.20.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_024465265.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES32e-95AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A2K1YZU80.0A0A2K1YZU8_POPTR; Uncharacterized protein
STRINGPOPTR_0010s25460.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-69ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]