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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.010G240800.1 |
Common Name | POPTR_0010s24710g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
MYB |
Protein Properties |
Length: 236aa MW: 26522.4 Da PI: 6.9625 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.010G240800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 29 | 2.5e-09 | 23 | 65 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
rWT eEd+++ +a + ++ + +W +Ia+++ +++ ++k+++
Potri.010G240800.1 23 RWTREEDKIFEQALTIFPENlpdRWQSIANHIR--KSAWEVKEHY 65
9*******************************8..89999**998 PP
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2 | Myb_DNA-binding | 43.9 | 5.3e-14 | 131 | 175 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E++l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky
Potri.010G240800.1 131 PWTEDEHKLFLVGLNKFGKGDWRSISRNVVITRTPTQVASHAQKY 175
8*****************************99************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MHQDFNFQTR CLTQPPHATA ATRWTREEDK IFEQALTIFP ENLPDRWQSI ANHIRKSAWE 60 VKEHYDILVH DVLAIDSGRV ELPTYRDDES VSWESSGGDD GGMVAAGAPP SGQICFGGKG 120 KQDTERKKGT PWTEDEHKLF LVGLNKFGKG DWRSISRNVV ITRTPTQVAS HAQKYFLRQN 180 SVKKERKRSS IHDITSVDNN TVGPSADDYW NSPPGPPANQ DGPPGLGYQN FRFQM*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young seedlings, developing leaves, sepals and trichomes. {ECO:0000269|PubMed:26243618}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}. |