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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.010G229400.1 |
Common Name | POPTR_0010s23610g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
C2H2 |
Protein Properties |
Length: 302aa MW: 33233.6 Da PI: 7.6146 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.010G229400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.9 | 0.00069 | 122 | 144 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C+++F++ L H +H
Potri.010G229400.1 122 YECKTCNRTFPSFQALGGHRASH 144
99**********99999998887 PP
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2 | zf-C2H2 | 12.6 | 0.00041 | 200 | 222 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ Cg F++ L H+r+H
Potri.010G229400.1 200 HECSVCGAEFTSGQALGGHMRRH 222
78********************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MEASEEVAAN VVKGKRTKRL RVQSPIFPYG LTANSSSGDG GTSWSPTSSV NEFQDSTEEE 60 EDMANCLILL AKGHSRDFPT QQQHRHQDYD SRGGADTTKF NSRKFLETAN STGSGKVGYY 120 VYECKTCNRT FPSFQALGGH RASHKKPKAT HNDERKKNLS PSSDEELDGH YKNVSSLCLQ 180 LSDNNANRGT FSNHNKGKIH ECSVCGAEFT SGQALGGHMR RHRGPLLSST TTLSLTPLAI 240 ESEEPKKARN ALSLDLDLNL PAPDDEKFAF ASKQQQHQQQ QQQQQNTPLV FSSPALVDCH 300 Y*
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