 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.010G186200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
Trihelix |
| Protein Properties |
Length: 280aa MW: 33004.8 Da PI: 10.1911 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.010G186200.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 25.8 | 2.9e-08 | 18 | 81 | 9 | 68 |
trihelix 9 aLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikege 68
+Liea ++ + +rg+ +++W+ev++ + r+ g+ +++ +qCk+++ l+k+yk +k
Potri.010G186200.1 18 TLIEAWGDRYINPNRGNVGQKDWKEVADTVnnRQNGVkpKKTDVQCKNRIVMLKKKYKIEKSKP 81
7999999999********************8877777667899***************998765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MAPPWLSRRL LERWRPYTLI EAWGDRYINP NRGNVGQKDW KEVADTVNNR QNGVKPKKTD 60
VQCKNRIVML KKKYKIEKSK PPPLSWPLCN RLDSLIGTNS NTTNTDKKPT SFTVKSKKKP 120
KKRMFSGLAS YSESSSDDDE DDMAWFEERL KKKRHRMEDV GLSDGAACRE LARAILKFGE 180
IPERIESSRQ RQMIELEKQR MEFTKEVEFE RLNMFVDAQL DHTKKSFKRD KFTSSSVLPV 240
VCRGRQEMWI FRTDSLQLNY FDKFVVHTDI YDSWIFPYN*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G05550.2 | 4e-45 | sequence-specific DNA binding transcription factors |
