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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.010G125600.1 |
Common Name | POPTR_0010s13540g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 343aa MW: 38179.5 Da PI: 4.5336 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.010G125600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.9 | 4.5e-17 | 122 | 170 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
+ GVr++k +g+W+AeIr p++ ++r +lg+f+t eeAa+a++a ++++e
Potri.010G125600.1 122 KPVGVRQRK-WGKWAAEIRNPVT---KARTWLGTFDTLEEAAQAYEAKKQEYE 170
789*****9.**********654...5***********************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MSPKRQSLLY TKTGNKTNDN KRILSQESKM ESTMRKIRVI CYDPYATESD SSDDESDKKS 60 SRKRFVREIN LPLVVTPQPK AFEPESSCQD SNNSAKSPGK KMRVLPETPT STFEAKKLAP 120 KKPVGVRQRK WGKWAAEIRN PVTKARTWLG TFDTLEEAAQ AYEAKKQEYE ALAMLASEKS 180 QNISSSLAIS QSHSHNSSKK QVSFASSGDS DDSVVSRTSP ASVLELDTSM VSNVTGECDL 240 VIKYEDIGSS VANLEIPDLD FMNDPLASCP IDQDLNLGLD FGNLIDEFGR FYDDYCVIDD 300 LDICGLNGEE PGELPDYDFE FGNEEFTYLD DHQQKPLNIA CQ*
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