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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.010G105600.1 |
Common Name | POPTR_0010s11600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ARR-B |
Protein Properties |
Length: 664aa MW: 72107.6 Da PI: 6.2043 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.010G105600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 89.5 | 3e-28 | 224 | 277 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
Potri.010G105600.1 224 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 277
79*******************.********************************8 PP
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2 | Response_reg | 75.2 | 2.5e-25 | 40 | 148 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl+vdD+ + ++ll+++l + y +v++++++++al+ll+e++ +D++l D+ mp+mdG++ll+ e++lp+i+++a g + + +
Potri.010G105600.1 40 VLVVDDDITCLRLLEKMLCRCLY-NVTTCSQATAALKLLRERKgcFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRG 128
89*********************.****************************************87754.558****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga d+l Kp+ +eel +
Potri.010G105600.1 129 IRHGACDYLIKPIREEELKN 148
*****************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 664 aa
Download sequence Send
to blast |
MAALQRVASS LSTSASSYGS CKGAGADLMF SDQFPAGLRV LVVDDDITCL RLLEKMLCRC 60 LYNVTTCSQA TAALKLLRER KGCFDVVLSD VHMPDMDGFK LLELVGLEMD LPVIMMSADG 120 RTSAVMRGIR HGACDYLIKP IREEELKNIW QHVIRKKWNE NKEQEHSGSF EDNDWYKRGN 180 DDTENASSVN EGAEGVLKGQ KKRNIAKEED DNELEIDDPS ASKKPRVVWS VELHQQFVSA 240 VNQLGIDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGVAQQGG ISNTFCGPLD 300 SNVKVNPLGR FDIQALAASS QIPPQTLAAL HAELFGRPTG SLVTTVDQPA LLQASMQGPK 360 CIPVEHGVAF GQPLVKCQTN ISKHFPRNVI SVEDVASGFG AWPSNSVGTV GSSSNLGGMN 420 SQNSNMLMDI LQQQKQQQQP LQQSSLSEPS RSINVQPSCL VVPSQSPATF QAGNSPASVD 480 QNCSYNRSTM IDYSLLSAQS NNSSLNIGQI LNGDLKTTGV SGYSGSVSIS PLSPCSVDPD 540 NTSQQGRSST MAIRAVRQLP GLVPNISNLQ GSYSARSSEV LDQRPLRNLG FVAKCTSIPS 600 RLAVDEFEST MSSLDHEKSY MEISGNKVKQ EPNIEYMDNA RVGIPILQQL PPAPSDLMSV 660 FTE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FN908141 | 0.0 | FN908141.1 Populus x canadensis mRNA for putative B-type response regulator 16 (rr16 gene), cultivar Dorskamp. |