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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.009G166300.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
Nin-like |
| Protein Properties |
Length: 219aa MW: 24842.1 Da PI: 9.4681 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.009G166300.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 35.5 | 2e-11 | 70 | 115 | 17 | 51 |
RWP-RK 17 pikdAAkeLg...........vclTvLKriCRqyGIkRWPhRkiks 51
++kdAA ++g +T LKri Rq+GI WP+Rkik+
Potri.009G166300.1 70 SLKDAAESIGgaytvcsncsfPYPTSLKRIRRQHGITQWPSRKIKK 115
89************5554444448*********************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MDKELKEEPN WRIIAASDGR LNTGENQSFA SSSPQDESSW ISHMAGAQKK GGKVAVTWNC 60
AQEPKEEFKS LKDAAESIGG AYTVCSNCSF PYPTSLKRIR RQHGITQWPS RKIKKADHSL 120
RKLQKIIDSA QGIKGSIQIE SFYSAFPELK SELCALNQKV ISQIHKTVRE LQSQLEPAQF 180
GQSLREEGVF RSLKPNWDFR DLQQEIGKRF KIDDFQWH*
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