PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.009G125400.1
Common NamePOPTR_0009s12830g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 601aa    MW: 65387 Da    PI: 6.9727
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.009G125400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.4e-10427485563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+s++
  Potri.009G125400.1 427 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTSQN 485
                         9*********************************************9998888777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-18423487IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76425488IPR004827Basic-leucine zipper domain
PfamPF001702.8E-9427485IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-10427483No hitNo description
SuperFamilySSF579593.52E-11427478No hitNo description
CDDcd147032.08E-24428477No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    Send to blast
MGDTEDANSE MIQRLQSSFG TTQSSSATMS KQPFSLINQL DVSQLNLNQT QLRARHFANF  60
YQNFSGDSNK RVGIPPSHPN QIPPISPYSQ IPVSRPANQQ MSTQNFSMGP THSRSLSQPS  120
SFFCLDSLPP LSPAPFRDSS SPTVSDPIST DVSMEDKDGS SHSLLPPSPF NRGNAPRVGE  180
SLPPRKAHRR SNSDIPFGNV LQCSPPLIPL RGSGGLERSL SGRENPAMAK PAQLVKKEWE  240
RGGESIAEGT GERKSEGDVD DLFSAYMNLD NIDALNSSGT DEKNGNENRE DLDSRASGTK  300
TNGGDSSDNE AESSVNESGG SVPRGGFSSS TEKREGIKRS AGGDIAPTSR HYRSVSMDSF  360
MGKLNFGDES PKLPPSPGTR PGQLSPTNSM DGNAFSLEFG NGEFSGAELK KIMANEKLAE  420
IASTDPKRAK RILANRQSAA RSKERKMRYI SELEHKVQTL QTEATTLSAQ LTLLQRDSVG  480
LTSQNNELKF RLQAMEQQAQ LRDALNEALN GEVRRLKIAT AEQGGDSDPS KGLVQQQLSV  540
NPQMFMQQPR PSQLNRQQLQ QQQQPSASQI NMHQLQQQQQ SSQPQPQQNG STTLKSDSNQ  600
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.009G125400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002313753.20.0transcription factor RF2a
RefseqXP_024464437.10.0transcription factor RF2a
TrEMBLB9HRE70.0B9HRE7_POPTR; Uncharacterized protein
STRINGPOPTR_0009s12830.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-167bZIP family protein