|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.009G103400.3 |
Common Name | POPTR_0009s10620g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
Family |
B3 |
Protein Properties |
Length: 466aa MW: 52956.9 Da PI: 6.2665 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.009G103400.3 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 59 | 8.4e-19 | 112 | 200 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
f k+l++s+v+ ++ lp +f++ h +k +++t+ le+esg+++ +++i ++ + l++GWk F+ an+L egD++vF+l++ s+f
Potri.009G103400.3 112 FAKTLVRSNVTVGFWMHLPMRFCKMHL-PK-NDTTVFLENESGEEYILNYIAER----TALSGGWKAFCAANNLHEGDVLVFHLVKPSRF- 195
89*********************9994.33.5679***************4444....55************************998888. PP
.EEEEE CS
B3 92 lvvkvf 97
+v ++
Potri.009G103400.3 196 -KVYIV 200
.66665 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MDAKEDQNTS PKPQLPISNP VPLNTYPRIR RRKPNMSKIK LTQIHEKSPE PEYKTGHELV 60 LYDKSGESRE PRSRKRKKDA FSVFYDSTET KSPAMELAEE IRTNLEAAYP SFAKTLVRSN 120 VTVGFWMHLP MRFCKMHLPK NDTTVFLENE SGEEYILNYI AERTALSGGW KAFCAANNLH 180 EGDVLVFHLV KPSRFKVYIV KGNGSSQGDG EFGIPSSAEK DVKSSKKAEP LKLLPVGHQE 240 ENNQENGLIA VENNKGYVAD QSENESEDRA SETLRVIKLS GPTVDFNNVK GIENFRILLN 300 GFAIDSELSE HHRTKYYELC RSQSSFLHSN LLNSINHKLA VEIIIGTVDI SEGIRSSKLS 360 SSQADYGVWD KTLKGFELLG MKVGFLRERL SRLMSLALES EEAMESECRE VRLEQARVDE 420 EMKSLELRLL KLKETRERLD DEMEILKENA EKHELTFQEA VNAPW*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 73 | 77 | RKRKK |
2 | 73 | 78 | RKRKKD |