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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.009G103400.2 |
Common Name | POPTR_0009s10620g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 477aa MW: 54102.2 Da PI: 6.1341 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.009G103400.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 58.9 | 8.8e-19 | 112 | 200 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
f k+l++s+v+ ++ lp +f++ h +k +++t+ le+esg+++ +++i ++ + l++GWk F+ an+L egD++vF+l++ s+f
Potri.009G103400.2 112 FAKTLVRSNVTVGFWMHLPMRFCKMHL-PK-NDTTVFLENESGEEYILNYIAER----TALSGGWKAFCAANNLHEGDVLVFHLVKPSRF- 195
89*********************9994.33.5679***************4444....55************************998888. PP
.EEEEE CS
B3 92 lvvkvf 97
+v ++
Potri.009G103400.2 196 -KVYIV 200
.66665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MDAKEDQNTS PKPQLPISNP VPLNTYPRIR RRKPNMSKIK LTQIHEKSPE PEYKTGHELV 60 LYDKSGESRE PRSRKRKKDA FSVFYDSTET KSPAMELAEE IRTNLEAAYP SFAKTLVRSN 120 VTVGFWMHLP MRFCKMHLPK NDTTVFLENE SGEEYILNYI AERTALSGGW KAFCAANNLH 180 EGDVLVFHLV KPSRFKVYIV KGNGSSQGDG EFGIPSSGAY GKEIISEPAE KDVKSSKKAE 240 PLKLLPVGHQ EENNQENGLI AVENNKGYVA DQSENESEDR ASETLRVIKL SGPTVDFNNV 300 KGIENFRILL NGFAIDSELS EHHRTKYYEL CRSQSSFLHS NLLNSINHKL AVEIIIGTVD 360 ISEGIRSSKL SSSQADYGVW DKTLKGFELL GMKVGFLRER LSRLMSLALE SEEAMESECR 420 EVRLEQARVD EEMKSLELRL LKLKETRERL DDEMEILKEN AEKHELTFQE AVNAPW*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 73 | 77 | RKRKK |
2 | 73 | 78 | RKRKKD |