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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.009G037100.1 |
| Common Name | POPTR_0009s04190g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
C2H2 |
| Protein Properties |
Length: 206aa MW: 23020.6 Da PI: 5.9773 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.009G037100.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.2 | 0.00013 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ Fs+ L H++ H
Potri.009G037100.1 31 YECTFCKRGFSNAQALGGHMNIH 53
99*******************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MDTDDQPSQE SPDQVTLDHE QEQGTSQARS YECTFCKRGF SNAQALGGHM NIHRKDKAKL 60
LKHSSSETQQ SLDIPKINPS FSPAITSLME SGRDESSIKW PFIVDKAGSD HDDTKRDKTQ 120
VGEIQKLGFF VQNSSSTEDH QNPSSQVHGI SKKSDLSSSS EIDLELRLWP EPQESSPGFH 180
MVVLKAKYMV RIFALHCIFL FEHGI*
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