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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.009G009400.1 |
| Common Name | POPTR_0009s01480g |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
TCP |
| Protein Properties |
Length: 178aa MW: 19496.9 Da PI: 5.6758 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.009G009400.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 99.6 | 5.4e-31 | 14 | 91 | 5 | 82 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssa 82
++ +++h+kv+gRdRR+Rl+++caar+F+L++eLG ++d++tieWLl+ a+p i++ tg + + + ++ +
Potri.009G009400.1 14 PKPRKDRHAKVNGRDRRIRLPVNCAARVFQLTQELGNKTDGETIEWLLRVAEPTIIAVTGKGIGTTNTIrgH--AQAARV 91
5788*********************************************************66666555321..222222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MKKASTSKTK VADPKPRKDR HAKVNGRDRR IRLPVNCAAR VFQLTQELGN KTDGETIEWL 60
LRVAEPTIIA VTGKGIGTTN TIRGHAQAAR VNTTSVSYSS DLHPLVSTGL SSPLMDPSEP 120
RYMEPIQTQG LISPNCEVSA DEPLSFPSEF DNLETNFDME FPVNDMFPSV SGNDHEE*
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