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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.008G120600.1 |
| Common Name | POPTR_0008s11950g |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
LBD |
| Protein Properties |
Length: 251aa MW: 27534.3 Da PI: 8.5745 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.008G120600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.2 | 8e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+C++C+vlr++C+++C+++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +PvyG+vg+++++++
Potri.008G120600.1 4 SCNGCRVLRKGCSDNCTIRPCLqwiktPDSQANATLFLAKFYGRAGLVNLIEAGPPKLRPAIFRSLLYEACGRIVNPVYGSVGMLWSGNWA 94
6****************************************************************************************** PP
DUF260 87 leqlkaelallke 99
+q++++++l ++
Potri.008G120600.1 95 QCQAAVDAVLKGS 107
*****99988766 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSDNCT IRPCLQWIKT PDSQANATLF LAKFYGRAGL VNLIEAGPPK 60
LRPAIFRSLL YEACGRIVNP VYGSVGMLWS GNWAQCQAAV DAVLKGSPIM SLPSSSEVPA 120
PHLISSLNTY DIRHVPRDQD SPELTKAKNQ TRFKRSIATR PNSQSEPTSR VNPGEWGFEP 180
VRDSCLGHLG NRGSYIKDED SIFSVETVEG SLWSQVEPDS FFKFNGQGDG SDVRLDLTLG 240
LGIVSRSHRM *
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