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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.008G101400.1 |
Common Name | POPTR_0008s10080g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
MYB |
Protein Properties |
Length: 322aa MW: 36312.3 Da PI: 7.017 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.008G101400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 59.1 | 9.7e-19 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
Potri.008G101400.1 29 RGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 76
89********************************************97 PP
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2 | Myb_DNA-binding | 49.5 | 1e-15 | 82 | 125 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++
Potri.008G101400.1 82 RGNITLEEQLMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 125
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MLMMDVKGNS NSSSSTTQSD EEMMGDLRRG PWTVEEDFKL INYIATHGEG RWNSLARCAG 60 LKRTGKSCRL RWLNYLRPDV RRGNITLEEQ LMILELHSRW GNRWSKIAQH LPGRTDNEIK 120 NYWRTRVQKH AKQLKCDVNS KQFKDTMRYL WMPRLVERIQ AAAATATNTS STSTATVSAP 180 ATNQHSISNR DVGTGNLVMA PHGINGNDFG VSHVTQSYTP ENSSTAASSD SFATQVSPVS 240 DLTTDYYNIP VNRNTNPDYF QAGQVGYSES MISPPGFFNH GLDFQAMEHS SNQWPMDSGD 300 TSDNMWNLED IWFLQQQLNN L*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed specifically in flowers. Restricted to anthers in maturing flowers. Strongest expression in the vascular and connective tissue where the anther attaches to the filament. Not detected in pollen. {ECO:0000269|PubMed:19091873}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling. Required for correct timing of anther dehiscence. Acts as a negative regulator of abscisic acid-induced cell death. Not involved in the regulation of BOI. Regulated by MYB21 and at a lower level by MYB24. Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873, ECO:0000269|PubMed:20921156, ECO:0000269|PubMed:23952703}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by jasmonate and pathogen infection. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873}. |