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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.008G091300.1 |
Common Name | POPTR_0008s09080g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 392aa MW: 44020.4 Da PI: 4.4634 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.008G091300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y GVr+++ +grWvAeI+d ++ r++lg+++taeeAa+a+++a+ l+g
Potri.008G091300.1 42 RYLGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 91
799******.7*********33....35**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 392 aa
Download sequence Send
to blast |
MARKRKAGEG EEERVSNDGN VGWDQMMEEA ESLHGVRRAR KRYLGVRQRP SGRWVAEIKD 60 TIQKIRVWLG TYDTAEEAAR AYDEAACLLR GANTRTNFWP CSPSSHSKPA LPPKIVNLLL 120 LRIKARHNSL TQTTTFPVNQ QEQEAREQEN QFDPFFEMPG DISIVENSDT ANSTADTMTI 180 SDHTSGFFES RYITEDHGST STFEVDDSWS NVDGSGQGGQ EEGRGEEEID MGLIDFQFDD 240 ALGSSFYHSP FDIAQEMMEP MEQEHHGDEP PMIREIMKRW KHERKFSASL YAYNGVSECL 300 RLAFRPGMPA VANGGYELPS NLGINSNNNE EEKKRDDMGK DAKEEVQEEV EIPQTPTEKG 360 SSSSSSSLSK EDGELSLWSS LDLPPICFNN I*
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