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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.008G089700.1 |
| Common Name | POPTR_0008s08920g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 382aa MW: 41911.1 Da PI: 8.22 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.008G089700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.1 | 4.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++++G g+W++ +++ g++R++k+c++rw +yl
Potri.008G089700.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLRRCGKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 49.5 | 1e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l
Potri.008G089700.1 67 RGKFNLQEEQSIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112
899*******************.*********.************996 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MVKSQCFEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLRRCG KSCRLRWTNY 60
LRPDIKRGKF NLQEEQSIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120
IDPVTHKPKA DSFGSGSGHS KGAASLSHMA QWESARLEAE ARLVRESKLT VPNPPKNILG 180
SAVSAQVSNK SSATPTERPR CLDVLKAWQG VVFSMFSVGS SDSLESPTST LNFSENALAI 240
PLIGVQKNPT TTLAFATNNA TCNRGTTVSE FDRGNQLECF EKLKDPAQVR RNLDSSMAIH 300
GISPYAGDHN AWFVDSSANE NAPMGNIIDG FSEILVCNSL DPNPTCSGEN INDNYAGNLE 360
DNYWNSLLNL VDASPTGSSV F*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
