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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.007G076800.1 |
Common Name | POPTR_0007s07090g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 323aa MW: 34945.5 Da PI: 7.2373 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.007G076800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.8 | 4.1e-21 | 124 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp ++ +r++lg+f+t+e Aa+a+++a+++++g
Potri.007G076800.1 124 KYRGVRQRP-WGKWAAEIRDP----IKaARVWLGTFDTPEAAARAYDEAALRFRG 173
8********.**********7....357************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MLPDSSRERE MSIMVTALTR VVAGNVPADD SDSSTAFSNN QGDCIHGGLS AKREREEEGG 60 CSEENERLCR AFGDGFLHGD DSSAGRATGI SVVTTSTVTP ASTQMTFTPV YEHNETRRDE 120 PQRKYRGVRQ RPWGKWAAEI RDPIKAARVW LGTFDTPEAA ARAYDEAALR FRGSKAKLNF 180 PENVKLRPSP PPSPTANQLT VSDSPSSGLL SLSTSSELLL HSQALHHTQN REISREQVSQ 240 PQLILGVGGY QKQPVSLYDQ MFLSSSFVSS NSSSSSTKSS GRMLFPAQKP GEFRPATSSQ 300 SSGNDCQLPA WSGYSHHTSS SG*
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