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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.007G035500.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 313aa MW: 35076.3 Da PI: 9.3703 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.007G035500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 59 | 8.5e-19 | 14 | 102 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
ffkv + ++s++l+lp f ++ g++++ +k tl+d + + W+v l k+ g v+++GWkeF+ + L +gDf++Fk+dg+sef
Potri.007G035500.1 14 FFKVY--LSDFSSRQLSLPPAFGIQFnGKNEALPKNATLKDGNAKIWQVGL--VKREGDWVIKDGWKEFACYHSLVDGDFLIFKYDGSSEF 100
77887..88899999*******777779999********************..9999999***************************9999 PP
.. CS
B3 91 el 92
e
Potri.007G035500.1 101 EV 102
54 PP
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2 | B3 | 43.8 | 4.6e-14 | 223 | 286 | 16 | 82 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82
+++pkkf++e++++ +k+++l+desg+ W v+ + + ++ +vlt+G +eF++ n+L +D + +
Potri.007G035500.1 223 IRIPKKFLRENNIE--LPKEIKLRDESGKLWPVQTSLWDSG-YTVLTSGFSEFCRMNKLVPRDQCKL 286
68*********866..889****************999886.789******************9965 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MVKPKRNVSF SNEFFKVYLS DFSSRQLSLP PAFGIQFNGK NEALPKNATL KDGNAKIWQV 60 GLVKREGDWV IKDGWKEFAC YHSLVDGDFL IFKYDGSSEF EVELYGNDGL KNNGLKKEGR 120 GLENKLSIHV KEELETEEDF IGSRPSTGCK QKDSNIEPRI TRSQGLFGKS GPKSSETKIA 180 KLGECKGAKA PSSVPREVPR FVMNITKITR FAGQGNMCSP IAIRIPKKFL RENNIELPKE 240 IKLRDESGKL WPVQTSLWDS GYTVLTSGFS EFCRMNKLVP RDQCKLFAGV PELKTWLEVE 300 SMTACPTFII IG*
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