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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.007G030700.1 |
| Common Name | POPTR_0007s12370g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
BES1 |
| Protein Properties |
Length: 318aa MW: 34089.1 Da PI: 9.3102 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.007G030700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 221.6 | 1.6e-68 | 5 | 148 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
g+sgr ptwkErEnnkrRERrRRaiaakiy+GLR qGn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ +e+ag+ +++s +
Potri.007G030700.1 5 GSSGRLPTWKERENNKRRERRRRAIAAKIYTGLRTQGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PTEIAGTPTNISAC 94
689*************************************************************************.9************* PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
ss+q s++ss+++spv+sy+asp+sssfpsps++d +++ + llp+l++ ++++
Potri.007G030700.1 95 SSIQPSPQSSNFPSPVASYHASPTSSSFPSPSRFDGNPS---TYLLPFLRNIASIPT 148
*************************************88...599999999887665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MTAGGSSGRL PTWKERENNK RRERRRRAIA AKIYTGLRTQ GNFKLPKHCD NNEVLKALCA 60
EAGWIVEEDG TTYRKGCKPP PTEIAGTPTN ISACSSIQPS PQSSNFPSPV ASYHASPTSS 120
SFPSPSRFDG NPSTYLLPFL RNIASIPTNL PPLRISNSAP VTPPLSSPTS RGSKRKADWE 180
SLSNGTLNSL HHPLLAASAP SSPTRRHHLT PATIPECDES DASTVDSGRW VSFLAGAPHV 240
APPSPTFNLV KPVAQQSGFQ DGVDRHGGLS WGAAAERGRG AEFEFENCRV KPWEGERIHE 300
IGVDDLELTL GGGKARG*
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 6e-30 | 9 | 87 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 6e-30 | 9 | 87 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 6e-30 | 9 | 87 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 6e-30 | 9 | 87 | 372 | 450 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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