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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.007G012100.1 |
| Common Name | POPTR_0007s14130g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
WOX |
| Protein Properties |
Length: 265aa MW: 29279.8 Da PI: 6.9304 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.007G012100.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.6 | 2.5e-19 | 27 | 87 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t++q+++L+el++ r p+ +e+++++++l +++ ++V++WFqN++a+e++
Potri.007G012100.1 27 TRWNPTTDQIRILKELYYIkgVRSPNGAEIQQISARLrkygKIEGKNVFYWFQNHKARERQ 87
8****************95469*************************************97 PP
|
| 2 | Wus_type_Homeobox | 111 | 6.7e-36 | 25 | 89 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRW+Pt++Qi+iL+ely+ +G+r+Pn +eiq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+
Potri.007G012100.1 25 TSTRWNPTTDQIRILKELYYiKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARERQKK 89
789****************99******************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MEPHQQQPNE DNNGGAKGNF LCRQTSTRWN PTTDQIRILK ELYYIKGVRS PNGAEIQQIS 60
ARLRKYGKIE GKNVFYWFQN HKARERQKKR LTNEVPMQQR TAWKPEDYYS YKYSNSNNNP 120
GFSSASSSAN TGVVTVGQTD SHGYGSVTMQ EKNSWDCSAP AGGSNGAGSG SMSNINYGSG 180
VDINSHSSSY AVFGQEQEAA AKIETLPLFP MLGEDISSSF NINNINPDFY YSSGCGYGDY 240
GNDTSSRTSL DLSLYSYNGQ PQDY*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In the active shoot meristem, it is specifically expressed in a small cell group underneath the presume position of stem cells. {ECO:0000269|PubMed:12208843}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
