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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.007G008200.1 |
Common Name | POPTR_0007s14590g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
HD-ZIP |
Protein Properties |
Length: 274aa MW: 30530.6 Da PI: 8.4847 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.007G008200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59 | 7.7e-19 | 129 | 183 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k
Potri.007G008200.1 129 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 183
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 125.1 | 3.2e-40 | 129 | 218 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke ++L+ +l
Potri.007G008200.1 129 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEMDCEFLKKCCETLTDENRRLQKELQDLK-SL 218
69*************************************************************************************9.44 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009735 | Biological Process | response to cytokinin |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MGCLDDGCNT GLVLGLGFTT TNLENTSRPA DNNKRLIKPQ IKPLMTGFEP SLSLGLSAET 60 YSLVDGKKGC EESIGAHDQL YRQASPHSAV SSFSSGRVKR ERDLSSEDIE VERVSSRVSD 120 EDEDGSNARK KLRLTKEQSA LLEESFKQHS TLNPKQKQAL ARQLNLRPRQ VEVWFQNRRA 180 RTKLKQTEMD CEFLKKCCET LTDENRRLQK ELQDLKSLKM AQPFYMHMPA ATLTMCPSCE 240 RIGGVGEGAS KSPFSMATKP HFYNSFTNPS AAC*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 177 | 185 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |