 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.006G191000.1 |
| Common Name | POPTR_0006s20540g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
G2-like |
| Protein Properties |
Length: 412aa MW: 46157.2 Da PI: 6.6725 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.006G191000.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.5 | 1.1e-31 | 236 | 290 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt++LHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+
Potri.006G191000.1 236 KTRIRWTQDLHEKFVECVNRLGGAEKATPKAILNLMDSDGLTIFHVKSHLQKYRI 290
68****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MNTRNIDCEE GVQQNHGVMI GDFVNLSSQY FGNQQIRNMA PRLQPAVMEA GCQQQNISPE 60
RSSSSILSRF ESPASSFYAT ERCMRFPQYD CQVGSSFCSQ YSKSYDSHQS SDPNYSINLG 120
EQADHNFGLN STLESVVKPH YSYYNSFDKS DKGLSSSSGN KLPSQQHNKF LDIHGTVSLG 180
NNFSVPFQGN QDRQVGCNPY SSPFAGLSFN SLEGKQSPRF SLGGGPTSSG KDLSSKTRIR 240
WTQDLHEKFV ECVNRLGGAE KATPKAILNL MDSDGLTIFH VKSHLQKYRI AKYMPEPSEG 300
KAEKRNSIND VSQLDIKTGF QIREALQLQL DVQRRLHEQL EIQRNLQLRI EEQGKQLKMM 360
FDQQQKTTNS LLNKQNLDIT SPDEPAFSLE DIDVSILEGS DNNTQFPSKI S*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 7e-23 | 236 | 293 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-23 | 236 | 293 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-23 | 236 | 293 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-23 | 236 | 293 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 7e-23 | 236 | 293 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
