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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.006G163400.1 |
Common Name | TINYL3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 290aa MW: 31394.2 Da PI: 5.7952 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G163400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.2 | 8.3e-18 | 68 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ ++GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g
Potri.006G163400.1 68 PVFRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALSIKG 118
579****998.**********854...59**********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MTDPPTSNSN SKKDSSSIYS YSSSSPTPSS TSSSGLSPNP VSKPDPEKNL RKPKRPRETN 60 SSNNSKHPVF RGVRMRTWGK WVSEIREPRK KNRIWLGTFS TPEMAARAHD VAALSIKGNS 120 AILNFPGLAG SLPRPASNSP RDVQAAAAKA ASMDFNSTVT TVTTNVCNDE NNSNNNSTAS 180 NNNGSSSSQM TQSSSSSSSS SSSSTVRVTS DVATPEELSE IVELPSLETS YEESPEFVLF 240 GDSWPYINQS WCYEDYGVKS NGYFSDQYLS IIPENNVITS GFETLLWEH*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF155922 | 0.0 | EF155922.1 Populus trichocarpa TINY-like protein (TINYL3) gene, complete cds. |