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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.006G138800.1 |
Common Name | POPTR_0006s14100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 210aa MW: 23414.1 Da PI: 4.6476 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G138800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.9 | 2.4e-18 | 16 | 66 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++kGVr +k +g+Wv+eIr p++ r r++lg++++ae+Aa+a +aa +l+g
Potri.006G138800.1 16 SKFKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 66
79*****999.**********933...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MVKHSVEKPV AERSDSKFKG VRKRKWGKWV SEIRLPNSRE RIWLGSYDSA EKAARAFDAA 60 LFCLRGRVAK FNFPENPPNI AGGRSLSPAE IQEAAARFAN SEPQRSQPDR FETDQSVSLS 120 ESRAESPCPS VVSDGTVQME GGELMWDGPF LDMLMNTGSC NHSTEYGIFQ GFDDLYSDFF 180 PPSLIPNLDY GEETNLDGVL EQGSFLWNF*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF155952 | 0.0 | EF155952.1 Populus trichocarpa RAP2-like protein (RAP2L11) gene, complete cds. |