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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.006G109100.1 |
Common Name | POPTR_0006s10950g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 334aa MW: 37687.5 Da PI: 6.5057 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G109100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 76.7 | 2.7e-24 | 133 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg++WrKYGqK++ +++fpr+YYrCt++ +C+++k+v+r +e+p + +tY+g H+++
Potri.006G109100.1 133 DDGHAWRKYGQKMILNAKFPRNYYRCTHKfdqHCQATKQVQRVEEEPPLYRTTYHGYHTCK 193
8***************************99999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MESSWPENLP SHRKKVIDEL LRGQEIAKKL KFVMSKSTGD DGSMSAENLV REIMNSFNST 60 LSILNGGGYD DDVSQTPATT KVCSPLWDGR KSSEDSGESS KSTATVKVKD RRGCYKRRRS 120 SHSWTNETST LTDDGHAWRK YGQKMILNAK FPRNYYRCTH KFDQHCQATK QVQRVEEEPP 180 LYRTTYHGYH TCKNLLKASD QFVLDPIDHF HTDSSTLLSF NNSSNHHQMM TNKQNHPFFT 240 TSFQSIKQEY YNKEDNDMPG YDPTIHNNQA LSSDYLLPTD DHDRISTFDH GDLISGVNSS 300 CTTSSHSLDI DSIMAESVGF GDGGDVLGFE FCG*
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