 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Potri.006G066400.1 |
| Common Name | POPTR_0006s06530g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 234aa MW: 27122.5 Da PI: 8.9964 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.006G066400.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W +eEd++l+ +v+ +G g+W+t++++ g+ R++k+c++rw +yl
Potri.006G066400.1 13 KGLWKPEEDLILKTYVETHGEGNWSTVSKRSGLMRCGKSCRLRWKNYL 60
678*******************************************97 PP
|
| 2 | Myb_DNA-binding | 49.7 | 8.4e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg ++++E++ +++ +k+lG++ W++Ia +++ gRt++++k++w+++l
Potri.006G066400.1 66 RGGMSQDEEDMIIRMHKLLGNR-WSLIAGRLP-GRTDNDVKNYWNTHL 111
67799*****************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MESKGAKPHE FKKGLWKPEE DLILKTYVET HGEGNWSTVS KRSGLMRCGK SCRLRWKNYL 60
RPNIRRGGMS QDEEDMIIRM HKLLGNRWSL IAGRLPGRTD NDVKNYWNTH LNKRCPSRKR 120
KTIDSKPDQN DNNTKKQYRS KRIRSLSNSQ PTCNTSPIGS TEELEGKNQE KEERSAVISD 180
AWIQQDAQSM NSCIESPMVL HNNATFFFED DPFLTYWDSF DMFESLGCGG DYW*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mainly expressed in the trichomes of new leaves. {ECO:0000269|PubMed:24803498}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activation factor positively regulating trichomes development (PubMed:24803498). Has a function nearly equivalent to that of GL1 and can complement gl1 mutants (PubMed:24803498). {ECO:0000269|PubMed:24803498}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin (IAA). {ECO:0000269|PubMed:9839469}. |
