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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.006G039000.3 |
Common Name | POPTR_0006s03720g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 403aa MW: 44496.8 Da PI: 7.3503 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G039000.3 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 117 | 159 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
k rr+++NReAAr+sR+RKka++++Le +L++ ++L+k
Potri.006G039000.3 117 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 159
788*************************988888887777765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MDSIFNQLKS SSQAIGADVQ FGTLNKSLAS SDINLSAAIV GSQTLPLQKE VQVNPVSIHS 60 NHPENWGETN MAEASPRTDT STDDTDEKNQ RFERGQLVAI AASDSSDKSK ERAGDQKTLR 120 RLAQNREAAR KSRLRKKAYV QQLESSRLKL TQLEQELQKA RQQGIFISSS GDQTHSMSGN 180 GALAFDAEYA RWLEEHNRQI SELRAAVNSH AGDTELRTIV DNVASHFSDV FRLKGTAAKA 240 DVFHILSGMW KTPAERCFMW IGGFRSSELL KLLVNQLEPL TEQQLMGIYN LQQSSQQAED 300 ALSQGMEALQ QSLAETLANG NPGSSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ 360 QTLEQMHRIL TTRQSARALL AIHDYFSRLR ALSSLWLARP QE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF195120 | 0.0 | EF195120.1 Populus tremula x Populus alba TGA transcription factor 2 mRNA, complete cds. |