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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.006G039000.2 |
Common Name | POPTR_0006s03720g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 333aa MW: 37049.6 Da PI: 8.9786 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G039000.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.8 | 1.6e-10 | 47 | 89 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
k rr+++NReAAr+sR+RKka++++Le +L++ ++L+k
Potri.006G039000.2 47 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 89
788*************************988888887777765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MAEASPRTDT STDDTDEKNQ RFERGQLVAI AASDSSDKSK ERAGDQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLESSRLKL TQLEQELQKA RQQGIFISSS GDQTHSMSGN GALAFDAEYA 120 RWLEEHNRQI SELRAAVNSH AGDTELRTIV DNVASHFSDV FRLKGTAAKA DVFHILSGMW 180 KTPAERCFMW IGGFRSSELL KLLVNQLEPL TEQQLMGIYN LQQSSQQAED ALSQGMEALQ 240 QSLAETLANG NPGSSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ QTLEQMHRIL 300 TTRQSARALL AIHDYFSRLR ALSSLWLARP QE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF195120 | 0.0 | EF195120.1 Populus tremula x Populus alba TGA transcription factor 2 mRNA, complete cds. |