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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.006G039000.1 |
Common Name | POPTR_0006s03720g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 471aa MW: 52000.9 Da PI: 7.1409 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.006G039000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.1 | 2.5e-10 | 185 | 227 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
k rr+++NReAAr+sR+RKka++++Le +L++ ++L+k
Potri.006G039000.1 185 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 227
788*************************988888887777665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MGSRTHNNFN NNNNNNKAVT EMPSYVPQLS TSNPIGTEAN NIHPSRVSDF ATFEQSLGFR 60 IDDAVDLSRN SIFNQLKSSS QAIGADVQFG TLNKSLASSD INLSAAIVGS QTLPLQKEVQ 120 VNPVSIHSNH PENWGETNMA EASPRTDTST DDTDEKNQRF ERGQLVAIAA SDSSDKSKER 180 AGDQKTLRRL AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQKARQ QGIFISSSGD 240 QTHSMSGNGA LAFDAEYARW LEEHNRQISE LRAAVNSHAG DTELRTIVDN VASHFSDVFR 300 LKGTAAKADV FHILSGMWKT PAERCFMWIG GFRSSELLKL LVNQLEPLTE QQLMGIYNLQ 360 QSSQQAEDAL SQGMEALQQS LAETLANGNP GSSGSSGNVA NYMGQMAMAM GKLGTLEGFL 420 RQADNLRQQT LEQMHRILTT RQSARALLAI HDYFSRLRAL SSLWLARPQE *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF195120 | 0.0 | EF195120.1 Populus tremula x Populus alba TGA transcription factor 2 mRNA, complete cds. |