PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.006G025800.1
Common NamePOPTR_0006s02670g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 268aa    MW: 29837.5 Da    PI: 5.2654
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.006G025800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.48.3e-15197240548
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         ++++r++kNRe+A rsR+R++a++ eLe kv  Le+eN++L+k+
  Potri.006G025800.1 197 RKQKRMIKNRESAARSRARRQAYTHELEIKVSHLEEENERLRKQ 240
                         689***************************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000414.4E-6118133IPR001630cAMP response element binding (CREB) protein
Gene3DG3DSA:1.20.5.1701.4E-14189240No hitNo description
PRINTSPR000414.4E-6192208IPR001630cAMP response element binding (CREB) protein
SMARTSM003381.1E-11193251IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.266195240IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-10197241No hitNo description
PfamPF001703.0E-12197240IPR004827Basic-leucine zipper domain
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
PRINTSPR000414.4E-6210230IPR001630cAMP response element binding (CREB) protein
PRINTSPR000414.4E-6230247IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MGSQGGSFEE ENPESLMGQG SLCSLTLDEV QNQLGNLGKP LGSMNLDDLL KSVDNVGAWS  60
APMNRQGSLT LSRDLSKKTV EEVWRDIQQL DKKDDDNPGR NAPFGEMTLE DFLVKAGVVT  120
ESTPVQQQES NQWMQFQLPS VQQPVYQNNM MTVVDAAYPD SQMNISPSSL MGTLSDTQTP  180
GRKRVAPGDV VEKTVERKQK RMIKNRESAA RSRARRQAYT HELEIKVSHL EEENERLRKQ  240
EKAEKVLPCA PPPEPKSQLR RTSSAPL*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.006G025800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002307931.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_024459059.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9LES35e-98AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLB9HDH30.0B9HDH3_POPTR; Uncharacterized protein
STRINGPOPTR_0006s02670.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-92ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]