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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.005G233300.1 |
Common Name | DREB5, POPTR_0005s25470g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 245aa MW: 26966.3 Da PI: 5.7683 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.005G233300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60 | 5.6e-19 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g
Potri.005G233300.1 43 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAATAYDAAARKLYG 92
69****999.**********8...3.35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MGGMSKSTTS GFGEKKQFKK PAQASSRKGC MRGKGGPENA LCTYKGVRQR TWGKWVAEIR 60 EPNRGARLWL GTFDTSHEAA TAYDAAARKL YGPEAKLNLP ELQVNNCQFP ASPANSQVTQ 120 MTYQPCQIIH NCSSTTSTCS SNTPSIESIE MTPMLYNHDP IMYFSNESVD SDGKGAVNEV 180 NFGRSEVEIK EFWSNFNVNI PFDDSIWVEA AMSINFPVVE DPGIFASNLM EGTGRDTLQT 240 PWCM*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription. {ECO:0000269|PubMed:11798174}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF155961 | 0.0 | EF155961.1 Populus trichocarpa putative DRE-binding protein 5 (DREB5) gene, complete cds. |