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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.005G227900.1 |
| Common Name | POPTR_0005s24950g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
ZF-HD |
| Protein Properties |
Length: 291aa MW: 32322 Da PI: 8.8097 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.005G227900.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 99.8 | 1.9e-31 | 71 | 128 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
+++rY+eCl+NhAa++Gg ++DGCgEfmp geeg+ +alkCaAC+CHRnFHRre + e
Potri.005G227900.1 71 SNTRYRECLRNHAANVGGSVYDGCGEFMPG-GEEGSLEALKCAACECHRNFHRREIDGE 128
5789*************************9.999*********************8865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MEIRGLENDI RTSVPSSYSH QSSGLEGRNG NHNGTTVLTY TQTLDHQRQP SRSPNPDRLA 60
IISSGPNSKT SNTRYRECLR NHAANVGGSV YDGCGEFMPG GEEGSLEALK CAACECHRNF 120
HRREIDGETQ FSPGSRRSAT MVHSLQLPPP LPSPAVLHHH HHHHQRYSMG LHTSPNTANM 180
VQPMSVAFGG VSGGTESSSE DLNPFQSNAD GVPPPPPYVM SKKRFRTKFT PEQKDKMMEF 240
ADKVGWRINK QDDEEVHKFC AEVGVRRQVF KVWMHNNKNL KKQPQPTSST *
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}. |
