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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.005G223100.1 |
Common Name | POPTR_0005s24450g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 144aa MW: 16168.7 Da PI: 7.0918 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.005G223100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 22 | 72 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+G+r+++ +g+++AeIrdp++ng +r +lg+++taeeAa+a+++a+ +++g+
Potri.005G223100.1 22 YRGIRRRP-WGKFAAEIRDPTKNG--ARRWLGTYDTAEEAARAYDRAAFAFRGH 72
9*******.***********9998..*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 144 aa
Download sequence Send
to blast |
METHQGEKNT KKQEKGRGEN AYRGIRRRPW GKFAAEIRDP TKNGARRWLG TYDTAEEAAR 60 AYDRAAFAFR GHLAILNFPN EYQHQDPSSA MSFASSSSFS TANPVNYGHE VSSTGGQEVI 120 EFEYLDNKLL EELLGTNDPS RQH*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 10 | 28 | KKQEKGRGENAYRGIRRRP |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |