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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.005G195000.1 |
Common Name | POPTR_0005s21690g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 453aa MW: 48539.3 Da PI: 8.6016 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.005G195000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 218 | 267 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
Potri.005G195000.1 218 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 267
7********.**********7.....337************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MCVLKVANPR GNSGEYSRYP YTDSDDNQEE RSYTAQQIFS ELNQPIQRHV EVTQSPHMFM 60 GYSSSAEMSA MVSALTHVVS GHRGSTSDWG SYGASGLGGA TITSTIVQAA PGSNTSPASP 120 SLSAYSSTSG SGSWIGQKRG REKEAGAAAQ LKESLPRVHR GFDDFRSSLG DSSSSGATAT 180 EEVSASTLVF STTATPSTTA TPSSETASLG ETGERKRRYR GVRQRPWGKW AAEIRDPHKA 240 ARVWLGTFET AEAAARAYDE AALRFRGSRA KLNFPENARL LPAQMQNVTA SQVPISRSQL 300 PSHHQLQSIS SPRQQAQRPQ VPAPALFQSQ PDIIRDYWEY SQLLQSSGDF HGQQQPPPSN 360 LLEQMFYNPQ LASLQSSTLS SLPSSTSGSS FAAVPSGSIS STLSPSASSF PLLFAGQQLG 420 YFRPPENQNP AAGSDFPVPP WTDCSRRPSS TG*
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