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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.005G191900.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
Trihelix |
Protein Properties |
Length: 609aa MW: 67986 Da PI: 6.5383 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.005G191900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 92 | 6.1e-29 | 66 | 150 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+laL+++r+ m+ ++r+++ k+plWeevs+k++e g++rs k+Ckek+en+ k++k++k+g+ ++ ++ +t+++fdqlea
Potri.005G191900.1 66 RWPRQETLALLKIRSGMDVAFRDASVKGPLWEEVSRKLAELGYNRSGKKCKEKFENVYKYHKRTKDGRTGK--QEGKTYRFFDQLEA 150
8********************************************************************96..45557*******85 PP
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2 | trihelix | 101 | 9.6e-32 | 434 | 519 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev aLi++r++++ +++++ k+plWee+s++mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
Potri.005G191900.1 434 RWPKVEVEALIRIRTNLDCKYQDNGPKGPLWEEISARMRKLGYNRNAKRCKEKWENINKYFKKVKESKKKR-PEDSKTCPYFQQLDA 519
8*********************************************************************8.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 609 aa
Download sequence Send
to blast |
MLGDSSSVLA TTTTSTPGGG GGGGGAGDHK EAPPLTGGNH EGGSNDVGGE EDKGKIEGDR 60 SYGGSRWPRQ ETLALLKIRS GMDVAFRDAS VKGPLWEEVS RKLAELGYNR SGKKCKEKFE 120 NVYKYHKRTK DGRTGKQEGK TYRFFDQLEA FESHPPSLSS PLSLPPQPPK APTPAVTAIA 180 MPVVNPSPNI VRASHSTVPS TAAATLATNM SQGIVTSAII YLTVPPFPST NPTILPPSQA 240 TNPTNPPHTN IPPSFPNFSP DLISNSTSSS TSSDVELQER RKRKRKWKDF FERLMKEVIQ 300 KQEEMQKKFL EAIERREHER MVREESWRMQ EMTRINRERE ILAQERSVAA SKDAAVMAFL 360 QKLSEEQNPG QIQNNPPPSQ PPRPPAPPPI LQLVPTPPPP LPQAVANVDM IMKSDNGDQN 420 FTSASPSTSA SPSRWPKVEV EALIRIRTNL DCKYQDNGPK GPLWEEISAR MRKLGYNRNA 480 KRCKEKWENI NKYFKKVKES KKKRPEDSKT CPYFQQLDAL YKEKNKIDGP SNMKPENSVP 540 LMVRPEQQWP PPQQEHRPDS EMEDLESDDH QNHDDEDDKN MDDEDEEEDE ASGYEVVANK 600 QTSMNTDE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 279 | 284 | RRKRKR |
2 | 279 | 285 | RRKRKRK |
3 | 280 | 285 | RKRKRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |