 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Potri.005G142600.1 |
| Common Name | POPTR_0005s18620g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 352aa MW: 37910.4 Da PI: 8.7247 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.005G142600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 64.4 | 2.1e-20 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEde l+++v+++G+++W++I++ ++ gR++k+c++rw +
Potri.005G142600.1 12 KGPWSPEEDEALKKLVQRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 57.6 | 2.9e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEd+++++a++++G++ W+tIar ++ gRt++ +k++w++
Potri.005G142600.1 66 AFTPEEDDRIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108
79******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MATTRKEMDR IKGPWSPEED EALKKLVQRH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60
QVEHRAFTPE EDDRIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMADDG 120
NLSNLEGYDG NLDVDDTQPS KRSVSAGSGV PLSTGLYMSP GSPSGSDVSD SSPPGLSSAH 180
NHNIYRPVAR TGGVLPPVET ASSSDNNDDD PPTLLSLSLP GADPATKLPN RVVEPTQERV 240
AGSTQERVAG STKERVAGST QEPKPNTVTS FLVAADPAQV TTPVVAGQTG RPGCGFVGLS 300
RELMTVMQEM IRREVRNYMM EQSGGGMCYQ GMSGEGFRNV AVNRVGVGKI E*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
