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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.005G126400.1 |
| Common Name | POPTR_0005s12790g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
BES1 |
| Protein Properties |
Length: 332aa MW: 36083.4 Da PI: 8.3292 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.005G126400.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 215.1 | 1.6e-66 | 5 | 148 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
g+s r ptwkErEnn rRERrRRaiaakiy+GLR qGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ +e+ag a++s +
Potri.005G126400.1 5 GSSARLPTWKERENNMRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PSEIAGMPANISAC 94
5899************************************************************************.************** PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
ss+q s++ss++aspv+sy+asp+sssfpsp+ +d +s+ + llp+l++ ++++
Potri.005G126400.1 95 SSIQPSPQSSNFASPVPSYHASPSSSSFPSPTCFDGNSS---TYLLPFLRNIASIPT 148
***********************************9966...699999999887655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009741 | Biological Process | response to brassinosteroid |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MTAGGSSARL PTWKERENNM RRERRRRAIA AKIYTGLRTQ GNYKLPKHCD NNEVLKALCA 60
EAGWIVEEDG TTYRKGCKPP PSEIAGMPAN ISACSSIQPS PQSSNFASPV PSYHASPSSS 120
SFPSPTCFDG NSSTYLLPFL RNIASIPTNL PPLRISNSAP VTPPRSSPTC RSSKRKVDWE 180
SLSNGSLNSF RHPLFAASAP SSPTRRPHLT PATIPECDES DASTVDSGRW LSFQAVAPQV 240
APPSPTFNLV KPVDQQCAFQ IGVDRHEGLS WGVAAERGRG AEFEFENCRV KPWEGERIHE 300
IGVDDLELTL GSGKVHGQAS IDDLAWERSN K*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 6e-30 | 9 | 86 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 6e-30 | 9 | 86 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 6e-30 | 9 | 86 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 6e-30 | 9 | 86 | 372 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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