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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.004G203400.3 |
Common Name | POPTR_0004s21360g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 498aa MW: 55367.2 Da PI: 7.7867 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.004G203400.3 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 193 | 235 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+
Potri.004G203400.3 193 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDLQ 235
6889*************************98888887776665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 498 aa
Download sequence Send
to blast |
MASHRVGETG LSSVPSNHHL PYAPVHGINT PSANFINQEG SAFDFGELEE AIVLQGVQIR 60 NDEAKAPLFT VAGRRAATLE MFPSWPIRFQ QTPRGSSKSG GESTDSGSAT NTLSSKADAH 120 LEPESPISKK ASSSDHYNQA FDQKHLQFQD QQQVDMANDT SRTGGRPSQQ NQSPAKTPHE 180 KRKVSTSEKP LDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIKLSQL EQDLQRARQQ 240 GLFLGGCGGA GGNISSGPAI FDMEYARWLE DDHRHMSELR TGLHSHLSDG ELRVIVDGYI 300 SHYDEIFRLK VEAAKSDVFH LITGMWSTPA ERCFLWMGGF RPSELIKMLI SQLDPLTEQQ 360 IMGIYNLQQS SQQAEEALSQ GLEQLQQSLV DTIAGGPVIG GMQQMAVALG KLANLEGFVR 420 QADNLRQQTL HQLRRILTVR QVARCFLVIG EYYGRLRALS SLWASRPRET MMSEDNSCQT 480 TTDLQMVHPS QNHFANF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}. |
Uniprot | TISSUE SPECIFICITY: Mostly expressed in stems, inflorescence apex and flowers, and, to a lower extent, in seedlings, leaves and siliques. {ECO:0000269|PubMed:20805327}. |
Functional Description ? help
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Source |
Description |
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Publications
? help Back to Top |
- Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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