 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.004G188800.1 |
Common Name | POPTR_0004s20020g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
Family |
C2H2 |
Protein Properties |
Length: 280aa MW: 30160.9 Da PI: 4.4555 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.004G188800.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.8 | 0.00072 | 253 | 276 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C +sF + Lk+H + H
Potri.004G188800.1 253 FSCKSCERSFGSDGALKSHSQAkH 276
89*****************76655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0005730 | Cellular Component | nucleolus |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MSSMEFWGVE VKAGEPLKVE PKDFYMIHLS QAALGESSKK GNESVPLFLK LDEKKLVLGT 60 LSPDKIPQLS FDLVFEREFE LSHNWKNGSV FFCGYQAAIP ENDSDFSDDG DEIPFEKVEN 120 VKFATGTDKA AKPEKPKANP VVPSKDDESD DDDSDDDSDE DDSGDGSEGM SLEEDLDDES 180 DSEDEETPKK AEQSKKRTSD SAIKTPVSSK KAKTATPQKT DGGKAGQVTP HPAKGKAASN 240 GNNPKTPKSG GNFSCKSCER SFGSDGALKS HSQAKHGDK*
|