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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.004G099600.1 |
Common Name | POPTR_0004s09870g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 189aa MW: 21962.8 Da PI: 9.7557 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.004G099600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 31.5 | 3e-10 | 71 | 179 | 2 | 94 |
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE..........EEETTEEEE-TTH.HHHHH CS
B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesgrsWevkliy........rkksgryvltkGW.keFvk 70
+k+++psd ++++rl +p + +e++ +++++ + ++++ d + + + +s++y++ +GW k+Fv+
Potri.004G099600.1 71 KKKMKPSDLGNLCRLLVPSDLVEKYilpflntdqikqvNQETNLGLKVSVWDMNTQ-------SmhqlvfkrWSTSRSYIFNDGWtKDFVR 154
699*************************8877666555334445555555554444.......223333345*************557*** PP
HHT--TT-EEEEEE-SS.SEE..EE CS
B3 71 angLkegDfvvFkldgr.sefelvv 94
+L egD + ++ d s+f+++v
Potri.004G099600.1 155 RRNLVEGDEIGLYWDTYhSRFNFNV 179
*********9999776556664444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MEKHGGFGRG EVPWNQPRNK ESAEELERSR VAFNLRRMRT SYTLGDLLEE SSRGVSTHLS 60 LYHHYDPFTI KKKMKPSDLG NLCRLLVPSD LVEKYILPFL NTDQIKQVNQ ETNLGLKVSV 120 WDMNTQSMHQ LVFKRWSTSR SYIFNDGWTK DFVRRRNLVE GDEIGLYWDT YHSRFNFNVL 180 SRAAAAAS*
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