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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.004G090900.1 |
Common Name | POPTR_0004s09000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GeBP |
Protein Properties |
Length: 349aa MW: 38850.7 Da PI: 9.3593 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.004G090900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 81.9 | 9.1e-26 | 74 | 169 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91
+f+r+wse Dei++LqGl++ +++g s +d+ fy+ +++s+s ++ksql+eK+rrL+kKf+ +++ a++g + s+ ++hd++ f+l
Potri.004G090900.1 74 KFHRIWSEPDEISFLQGLLSS-SSQGLSFPKDLPFFYDRFSNSMSQPYTKSQLSEKMRRLRKKFRSTSSRlARNGFNYSLLSPHDRSLFDL 163
699****************98.889*9*99****************************************88999**************** PP
DUF573 92 skkiWg 97
sk++W
Potri.004G090900.1 164 SKQLWS 169
*****7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MDSTPVPQHL PFKPSSSSSA SKLPIKRKTP DSLHHHHLLS PKLETSSTTT PTTTNPDAIS 60 TPTTNSESKP PPFKFHRIWS EPDEISFLQG LLSSSSQGLS FPKDLPFFYD RFSNSMSQPY 120 TKSQLSEKMR RLRKKFRSTS SRLARNGFNY SLLSPHDRSL FDLSKQLWSP EFASSSPFGG 180 NKSTGSNSNS NFDGNVSSFR PDNVKRTKLD EDLVGVKGSF LPVFALPCEN VNVSNELNDL 240 ESLDLDEFDD GYVVKMREGN VGWEVDKGVS GCGGGCGSVA VKSVAKSVLN VFDECVKEVK 300 KVVLKERLDS SMEGKKEKDF QRRWREQRVA EFDVLALRLR LLLDNSAK*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G28040.1 | 3e-11 | DNA-binding storekeeper protein-related transcriptional regulator |