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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.004G074300.1 |
| Common Name | POPTR_0004s07270g |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
MYB_related |
| Protein Properties |
Length: 488aa MW: 53821 Da PI: 6.3919 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.004G074300.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 60 | 104 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+
Potri.004G074300.1 60 RERWTEEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 104
78******************88.*********.************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009734 | Biological Process | auxin-activated signaling pathway |
| GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 488 aa
Download sequence Send
to blast |
MAIQDQCGGT RLNLVLPAGN GISLSAPLNN ASGQQLKEQF SCGSDYSPKA RKPYTITKQR 60
ERWTEEEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH AQKFFSKVVR ESGGSNTSSV 120
EPIEIPPPRP KRKPMHPYPR KLAHPLEKEL LIPEKSLRSS SPNFSISEQE NQSPTSVLSA 180
VGSDALGSTD SDTPNHSLSP VSFAGGVHHA DSSPEEDGSP SPATASSVPD EQFPKVEKLD 240
SSPEENVSSD EPVVEETSTR SLKLFGRTVL VTEWHKPSSP NMGTSKLSTP DAAEEKLVRP 300
LTLNNVAAEF PFRNGESTWS PLPHGSHGAL CYKKFQKENS SPAQNDSAPL PWWTLYGAMP 360
FPCIPFHKKE PAIENLDSKG DEVQDKEIPK EVSWTGSNSG LVSEGENVDK NMDAETESQQ 420
FSYEEKELSP IFELKLTRKS ASSGSKVINE KCPKGFVPYK KRIAERDSQS STITGEEREE 480
QRIRLCL*
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