 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Potri.004G047600.1 |
| Common Name | POPTR_0004s04720g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
ERF |
| Protein Properties |
Length: 210aa MW: 22925.8 Da PI: 9.4026 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.004G047600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.2 | 2.7e-20 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrdps+ + r++lg+f+taeeAa+a++ a+++++g
Potri.004G047600.1 28 HFRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDTAAREFRG 77
69*******.**********965...6************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MAPREKTAAV KASGGGIVGG GGGGKEVHFR GVRKRPWGRY AAEIRDPSKK SRVWLGTFDT 60
AEEAARAYDT AAREFRGSKA KTNFPYPSCE NVKKNSPSQS STVEFCSSDA PLDLNLGPAV 120
STVRLPFQPM AMNQQQVVYF DAFMKSQYRR MVFDHGYHHH PNQPVIFSCG GVLSDSDSSS 180
VVDLNHQDVK TPRRSVDLDL NLPPPPEIA*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, mostly in root tip, lateral root tips, cortex and vascular tissues. {ECO:0000269|PubMed:10945353}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}. |
