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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.004G029800.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bHLH |
Protein Properties |
Length: 210aa MW: 23607.4 Da PI: 6.0821 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.004G029800.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.4 | 7.2e-10 | 41 | 85 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ +ErrRR+++ +++ +Lr l+P + ++K +i e A+ YI++L
Potri.004G029800.1 41 NLHAERRRREKLSNRLLTLRALVPII-----TNMNKGTIIEDAITYIQEL 85
5579*********************6.....58***************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0048656 | Biological Process | anther wall tapetum formation |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MTMKYLAMNE LGLADQEGSC WGRMGRKRTS YDDTVGYKSK NLHAERRRRE KLSNRLLTLR 60 ALVPIITNMN KGTIIEDAIT YIQELKKNVE ALTDMLQEME ASSSEEEFKT RVNEIDASEE 120 MKLCGIKEDV QVTNIEGDKL WIKIILEKKR GGFARLMEKM ACFGLELIDS NVTTSKGAML 180 VTACVEGAFG DTLTVQQTKE LLTQIIKGI*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 44 | 49 | ERRRRE |
2 | 45 | 50 | RRRREK |