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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.003G220000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 141aa MW: 16671.4 Da PI: 10.0731 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.1 | 6.8e-07 | 3 | 64 | 2 | 63 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ k + kqk Re rr+Rq+Kk+ + e + k + eN+ Lk+++++l++e+ +l++++ Potri.003G220000.1 3 KPEKTGMQKQKKREIDRRYRQKKKKAVVETKIKLAMTMIENENLKSTVQKLEQEIIQLTKQL 64 566778899*************************************************9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-6 | 5 | 67 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MQKPEKTGMQ KQKKREIDRR YRQKKKKAVV ETKIKLAMTM IENENLKSTV QKLEQEIIQL 60 TKQLNSIEPR PDQTTYDELQ QKIKYLRVEN EVTKCLLKDT DASYISNMIK VLKENEDMKR 120 TIEHYERLSS HAGCLKKLET * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 12 | 26 | KKREIDRRYRQKKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.003G220000.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002299106.1 | 1e-27 | uncharacterized protein LOC7457698 | ||||
TrEMBL | A0A2K2BAV5 | 3e-95 | A0A2K2BAV5_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0003s21110.1 | 6e-88 | (Populus trichocarpa) |
Link Out ? help Back to Top | |
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Phytozome | Potri.003G220000.1 |