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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.003G189700.1 |
Common Name | POPTR_0003s18900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
MYB |
Protein Properties |
Length: 569aa MW: 62101.9 Da PI: 4.852 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G189700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.8 | 2.2e-17 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l
Potri.003G189700.1 39 KGPWTSAEDAILIEYVKKHGEGNWNSVQKHSGLFRCGKSCRLRWANHL 86
79******************************************9986 PP
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2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g++T eE++l++++++++G++ W++ a++++ gRt++++k++w++
Potri.003G189700.1 92 KGAFTHEEEQLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 135
799*******************.*********.***********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009789 | Biological Process | positive regulation of abscisic acid-activated signaling pathway |
GO:0043068 | Biological Process | positive regulation of programmed cell death |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0045926 | Biological Process | negative regulation of growth |
GO:0048235 | Biological Process | pollen sperm cell differentiation |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 569 aa
Download sequence Send
to blast |
MSRTTSESED GMISKDQTGL PLGEEGSYGG STNGVGLKKG PWTSAEDAIL IEYVKKHGEG 60 NWNSVQKHSG LFRCGKSCRL RWANHLRPNL KKGAFTHEEE QLIIELHAKM GNKWARMAAH 120 LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVSLQTLQGS QQCLDINGMD SGNKGQHDIL 180 QTHNYGIPDV MFDNLKTNRS ILPYVPELPD ISASSILMKG LCSSQYGSFM SPTMHRQKRL 240 REATTLLSSF SGGMKNDFHL FDQFQDGDKA AQYFGLSFPF DPDSATKNPE IFGENQGSHT 300 LANGDFSASK PTSEAVKFEL PSLQYAETDL GGWGASCSPS PLIESVDTFI QSPPTGTVES 360 NFPSPRNSGL LDALLYEART LSSAKNQSSD KSSNSSTITP GDNADCSALN ISETEWEDYG 420 DPISPLGHPA ASLFSECTPI SASGSSLDES PPTETLTGSK RKFGCSSECN MKLEPVDHTW 480 TADREKESYT QLDITRPDAL LDSDWLEHDS GYGKDQVIMT EAIATLLGDD LSSEYKQMAA 540 GASTDHGWGL GSCSWNNMPA VCQMSELP*
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