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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.003G150800.1 |
Common Name | POPTR_0003s15040g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 289aa MW: 31796.8 Da PI: 6.9538 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G150800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.9 | 1.7e-20 | 129 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + k +r++lg+f+ta eAaka++ a+ +l+g
Potri.003G150800.1 129 HYRGVRRRP-WGKYAAEIRDP---NkKGARVWLGTFDTAIEAAKAYDSAAFRLRG 179
7********.**********9...4345*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MASFDEASAL ELIREHLLTD FASMDSLITN LDDLCSTSSS CITTDYIKTE STEFDPFNQS 60 EHPQPKLQSQ SSIESKPQSS PKSPSTLSQR KPSMIKNIAI PPPATLNMTP QVVQPVVIKA 120 DVSSEQERHY RGVRRRPWGK YAAEIRDPNK KGARVWLGTF DTAIEAAKAY DSAAFRLRGS 180 KAILNFPLEA GKSNSQQPEQ FLETSSKKRK IEEIESSMES TGSVITNKVA KRESSSPETE 240 VKAAATEPLT PSSWKGFWDG EVMGIFNVPP LSPLSPHPSF GYSRLMVV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC216594 | 0.0 | AC216594.1 Populus trichocarpa clone POP017-A13, complete sequence. |