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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.003G139300.1 |
Common Name | POPTR_0003s13910g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 312aa MW: 34449.8 Da PI: 9.5889 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G139300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 106 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+
Potri.003G139300.1 106 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRS 155
59******9.**********954...5************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MERMQENNSS FAFNTADIGS SLSQLILAGG TNTLDSIFSH CQPARSLTSP AFEPLGSSVY 60 LRQRDLLQKF SEENRINTSL SHNLQTNPLQ NPVHSSNYLA PTKKKLYRGV RQRHWGKWVA 120 EIRLPQNRMR VWLGTYDTAE AAAYAYDRAA YKLRSQYARL NFPNLKDPAK LGFTDCSKLN 180 ALKNTVDAKI QAIFQKVKKE RAKKNAAKKS NVDGKSTGSK KPVKVDSNAS TPSPASSSSF 240 STLFSGDNWG GSELVSPAVS EDGFWKCESS SSPSVSTDCP VMVPQAMEFE DCSLARMPSY 300 DPELIWEVLA N*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |